Skip to content
COVID-19 Pandemic Visualization and Model Fitting Tool
Open source Matlab codes: https://github.com/MunskyGroup/Matlab_Wrap_for_JHU_COVID19
Load Johns Hopkins Data on Growing Pandemic
Plot, fit epidemic growth models, and compare different countries and states.
Make maps and videos of current pandemic.
Fit simple SIR models to pandemic spread in different countries or states.
Basic Two-Species FSP Analysis Software
- FSP Toolkit for Low Resolution Screens FSP_Toolkit_LowRes.zip
- FSP Toolkit for High Resolution Screens FSP_Toolkit_HighRes.zip
- For a description of these tools, please see: Munsky, B., Modeling Cellular Variability, in Quantitative Biology From Molecular to Cellular Systems, M. Wall, Ed. (Taylor & Francis Group, New York, 2012). preprint (.pdf)
q-bio Textbook, Chapter 30 GUI
Stochastic System Identification Toolkit