Publications

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  1. A. Weron, K. Burnecki, E.J. Akin, L. Solé, M. Balcerek, M.M. Tamkun, and D. Krapf, "Ergodicity breaking on the neuronal surface emerges from random switching between diffusive states", Sci. Rep. 7, 5404 (2017)  pdf, Suppl. Mat.

  2. S. Sadegh, J.L. Higgins, P.C. Mannion, M.M. Tamkun, and D. Krapf, "Plasma Membrane is Compartmentalized by a Self-Similar Cortical Actin Meshwork", Phys. Rev. X  7, 011031 (2017)  pdf, Suppl. Mat.
    Source story, Phys. Buzz story

  3. O. Wiggan, B. Schroder, D. Krapf, J.R. Bamburg, and J.G. DeLuca, "Cofilin regulates nuclear architecture through a myosin-II dependent mechanotransduction module", Sci. Rep.  7, 40953 (2017)  pdf

  4. E.J. Akin, L. Solé, B. Johnson, M. el Beheiry, J.-B. Masson, D. Krapf, and M.M. Tamkun, "Single-molecule imaging of Nav1.6 on the surface of hippocampal neurons reveals somatic nanoclusters", Biophys. J.  111, 1235 (2016)  pdf

  5. A. Alvau, M.A. Battistone, M.G. Gervasi, F.A. Navarrete, X. Xu, C. Sánchez-Cárdenas, J.L. De la Vega-Beltran, V.G. Da Ros, P. Greer, A. Darszon, D. Krapf, A.M. Salicioni, P. Cuasnicu, P.E. Visconti, "The tyrosine kinase FER is responsible for the capacitation-associated increase in tyrosine phosphorylation in murine sperm", Development  143, 2325 (2016) pdf

  6. D. Krapf, G. Campagnola, K. Nepal, and O.B. Peersen, "Strange kinetics of bulk-mediated diffusion on lipid bilayers", Phys. Chem. Chem. Phys. 18, 12633 (2016) pdf

  7. G. Campagnola, K. Nepal, B.W. Schroder, O.B. Peersen, and D. Krapf, "Superdiffusive motion of membrane-targeting C2 domains", Sci. Rep. 5, 17721 (2015)  pdf,  Suppl. Mat.

  8. P.D. Fox, C.J. Haberkorn, E.J. Akin, P.J. Seel, D. Krapf, and M.M. Tamkun, "Induction of stable endoplasmic reticulum/plasma membrane junctions by Kv2.1 potassium channels", J. Cell Sci. 128, 2096 (2015) pdf

  9. D. Krapf, "Mechanisms underlying anomalous diffusion in the plasma membrane", Current Topics in Membranes  75, 167 (2015) pdf

  10. D. Krapf, "Dynamic fluctuations in single-molecule biophysics experiments - Comment on Extracting physics of life at the molecular level: A review of single-molecule data analyses", Phys. Life Rev. 13, 148 (2015) pdf

  11. S. Sadegh, E. Barkai, and D. Krapf, "1/f noise for intermittent quantum dots exhibits non-stationarity and critical exponents" New J. Phys.  16, 113054 (2014)  pdf,  Supporting Material

  12. A.V. Weigel, M.M. Tamkun, and D. Krapf, "Quantifying the dynamic interactions between a clathrin-coated pit and cargo molecules" Proc. Natl. Acad. Sci. USA  110, E4591 (2013)  pdf,  Supporting Information

  13. P.D. Fox, C.J. Haberkorn, A.V. Weigel, J.L. Higgins, E.J. Akin, M.J. Kennedy, D. Krapf, and M.M. Tamkun, "Plasma membrane domains enriched in cortical endoplasmic reticulum function as membrane protein trafficking hubs", Mol. Biol. Cell  24, 2703 (2013) pdf

  14. D. Krapf, "Nonergodicity in nanoscale electrodes", Phys. Chem. Chem. Phys. 15, 459 (2013) pdf

  15. A.V. Weigel, P.D. Fox, E.J. Akin, K.H. Ecklund, M.M. Tamkun, and D. Krapf, "Size of cell-surface Kv2.1 domains is governed by growth fluctuations", Biophys. J.  103, 1727 (2012)  pdf,  Supporting Material

  16. E. Deutsch, A.V. Weigel, E.J. Akin, P. Fox, G. Hansen, C.J. Haberkorn, R. Loftus, D. Krapf, and M.M. Tamkun, "Kv2.1 cell surface clusters are insertion platforms for ion channel delivery to the plasma membrane", Mol. Biol. Cell  23, 2917 (2012) pdf,  Suppl. Mat.

  17. A.V. Weigel, S. Ragi, M.L. Reid, E.K.P. Chong, M.M. Tamkun, and D. Krapf, "Obstructed diffusion propagator analysis for single-particle tracking", Phys. Rev. E  85, 041924 (2012)  pdf,  Suppl. Mat.

  18. A.V. Weigel, B. Simon, M.M. Tamkun, and D. Krapf, "Ergodic and nonergodic processes coexist in the plasma membrane as observed by single molecule tracking", Proc. Natl. Acad. Sci. USA 108, 6438 (2011) pdf,  Supporting Information

  19. T. Wojcik and D. Krapf, "Solid-state nanopore recognition and measurement using Shannon entropy", IEEE Photonics J. 3, 337 (2011) pdf, MATLAB codes

  20. M.Y. Wu, R.M.M. Smeets, M. Zandbergen, U. Ziese, D. Krapf, P.E. Batson, N.H. Dekker, C. Dekker, and H.W. Zandbergen, "Control of Shape and Material Composition of Solid-State Nanopores", Nano Lett. 9, 479 (2009) pdf

  21. M.A.G. Zevenbergen, D. Krapf, M.R. Zuiddam, and S.G. Lemay, “Mesoscopic concentration fluctuations in a fluidic nanocavity detected by redox cycling”, Nano Lett. 7, 384 (2007) pdf, cover page

  22. M.A.G. Zevenbergen, D. Krapf, M.R. Zuiddam, and S.G. Lemay, “Giant amplification of redox current in a nanofluidic channel”, Proceedings of the 10th Micro Total Analysis Systems Conference, 654-656 (2006) Tokyo, Japan. pdf

  23. D. Krapf, B.M. Quinn, M.Y. Wu, H. Zandbergen, C. Dekker and S.G. Lemay, “Experimental observation of nonlinear ionic transport at the nanometer scale”, Nano Lett. 6, 2531 (2006) pdf

  24. U.F. Keyser, B.N. Koeleman, S. van Dorp, D. Krapf, R.M.M. Smeets, S.G. Lemay, N.H. Dekker, and C. Dekker, “Direct force measurements on DNA in a solid-state nanopore”, Nature Physics 2, 473 (2006) pdf

  25. D. Krapf, M.Y. Wu, R.M.M. Smeets, H. Zandbergen, C. Dekker and S.G. Lemay, “Fabrication and characterization of nanopore-based electrodes with radii down to 2 nm”, Nano Lett. 6, 105 (2006) pdf

  26. R.M.M. Smeets, U.F. Keyser, D. Krapf, M.Y. Wu, N.H. Dekker y C. Dekker, “Salt-dependence of ion transport and DNA translocation through solid-state nanopores”, Nano Lett. 6, 89 (2006) pdf

  27. U.F. Keyser, D. Krapf, B.N. Koeleman, R.M.M. Smeets, N.H. Dekker, and C. Dekker, “Nanopore tomography of a laser focus”, Nano Lett. 5, 2253 (2005) pdf

  28. A. Sa'ar, Y. Reichman, M. Dovrat, D. Krapf, J. Jedrzejewski, I. Balberg, “Resonant coupling between surface vibrations and electronic states in silicon nanocrystals at the strong confinement regime”, Nano Lett. 5, 2443 (2005) pdf

  29. M.Y. Wu, D. Krapf, M. Zandbergen, H. Zandbergen, and P.E. Batson, “Formation of nanopores in a SiN/SiO2 membrane with an electron beam”, Appl. Phys. Lett. 87, 113106 (2005) pdf

  30. S.G. Lemay, D.M. van den Broek, A.J. Storm, D. Krapf, R.M.M. Smeets, H.A. Heering, C. Dekker, “Lithographically fabricated nanopore-based electrodes for electrochemistry”, Anal. Chem. 77, 1911 (2005) pdf

  31. D. Krapf, S.-H. Kan, U. Banin, O. Millo, and A. Sa’ar, “Intersublevel optical transitions in InAs nanocrystals probed by photoinduced absorption spectroscopy: The Role of Thermal Activation”, Phys. Rev. B 69, 073301 (2004) pdf

  32. D. Krapf, A. Davidi, J. Shappir, and A. Sa’ar, “Infrared photo-induced absorption spectroscopy of porous silicon”, Phys. St. Sol. A 197, 566 (2003) pdf

  33. D. Krapf, B. Adoram, K. L. Wang, J. Shappir and A. Sa’ar, “Infrared multispectral detection using Si/SixGe1-x quantum well infrared photodetectors”, Appl. Phys. Lett. 78, 495 (2001) pdf

  34. B. Adoram, D. Krapf, M. Levy, R. Besserman, K. L. Wang, J. Shappir, and A. Sa’ar, “Thermal relaxation processes in Si1-xGex/Si quantum wells studied by intersubband and inter-valence band optical spectroscopy”, Physica E 7, 255 (2000) pdf

  35. B. Adoram, D. Krapf, M. Levy, R. Besserman, S. Thomas, K. L. Wang, J. Shappir, and A. Sa’ar, “Thermal relaxation processes probed by intersubband and intervalence-band transitions in Si/Si1-xGex multiple quantum wells”, Appl. Phys. Lett. 75, 2232 (1999) pdf

Last modified on Tuesday, 29 August 2017 19:13