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J. Wilson Publications


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Journal Publications:


  1. J. W. Wilson, F. E. Robles, S. Deb, W. S. Warren, and M. C. Fischer, "Comparison of pump-probe and hyperspectral imaging in unstained histology sections of pigmented lesions," Biomed. Opt. Express, vol. 8, no. 8, pp. 3882–3890, 2017.
  2. S. R. Domingue, R. A. Bartels, A. J. Chicco, and J. W. Wilson, "Transient absorption imaging of hemes with 2-color, independently tunable visible-wavelength ultrafast source," Biomed. Opt. Express, vol. 8, no. 6, pp. 2807–2821, 2017.
  3. M. C. Fischer, J. W. Wilson, F. E. Robles, and W. S. Warren, "Invited Review Article: Pump-probe microscopy," Rev. Sci. Instrum., vol. 87, no. 3, p. 031101, 2016.
  4. F. Robles, S. Deb, J. Wilson, C. Gainey, M. Selim, P. Mosca, D. Tyler, M. Fischer, and W. Warren, "Pump-probe imaging of pigmented cutaneous melanoma primary lesions gives insight into metastatic potential," Biomed. Opt. Express. 6, 3631-3645 (2015).
  5. Wilson, J.W., Park, J.K., Warren, W.S., Fischer, M.C. "Flexible digital signal processing architecture for narrowband and spread-spectrum lock-in detection in multiphoton microscopy and time-resolved spectroscopy." Review of Scientific Instruments. 86 033707 (2015).
  6. Wilson, J.W., Degan, S., Gainey, C.S., Mitropoulo, T., Simpson, M.J., Zhang, J.Y., Warren, W.S. "Comparing in vivo pump-probe and multiphoton fluorescence microscopy of melanoma and pigmented lesions." Journal of Biomedical Optics. 20 051012 (2015).
  7. Simpson, M.J., Wilson, J.W., Robles, F., Dall, C., Glass, K., Simon, J. Warren, W. "Near-Infrared Excited State Dynamics of Melanins: the Effects of Iron Content, Photo-Damage, Chemical Oxidation, and Aggregate Size." The Journal of Physical Chemistry Section A. 118 993-1003 (2014).
  8. Robles, F.E., Wilson, J.W., and Warren, W.S. "Quantifying melanin spatial distribution using pump-probe microscopy and a two-dimensional morphological autocorrelation transformation for melanoma diagnosis." Journal of Biomedical Optics 18 120502 (2013).
  9. Wilson, J.W., Vazjovic, L., Robles, F.R., Cummings, T.J., Mruthyunjaya, P.M., and Warren, W.S. "Imaging microscopic pigment chemistry in conjunctival pigmented lesions using pump-probe microscopy." Investigative Ophthalmology & Visual Science 54 6867-6876 (2013).
  10. Simpson, M.J., Glass, K., Wilson, J.W., Wilby, P.R., Simon, J.D., and Warren, W.S. "Pump-Probe Mi-croscopic Imaging of Jurassic-Aged Eumelanin." Journal of Physical Chemistry Letters 4 1924-1927 (2013). [Erratum in Journal of Physical Chemistry 5 946 (2014).]
  11. Robles, F.E., Samineni, P., Wilson, J.W., and Warren, W.S. "Pump-probe nonlinear phase dispersion spec-troscopy." Optics Express 21 9353-9364 (2013).
  12. Simpson, M.J., Wilson, J.W., Phipps, M.A., Robles, F.E., Selim, M.A., and Warren, W.S. "Nonlinear Microscopy of Eumelanin and Pheomelanin with Subcellular Resolution." Journal of Investigative Dermatology 133 1822-1826 (2013).
  13. Wilson, J.W., Degan, S. Warren, W.S., and Fischer, M.C. "Optical clearing of archive-compatible paraffin embedded tissue for multiphoton microscopy." Biomedical Optics Express 3 2752-2760 (2012). [Erratum in Biomedical Optics Express 4 219 (2013).]
  14. Stokes, A.M., Wilson, J.W., and Warren, W.S. "Characterization of restricted di usion in uni- and multi-lamellar vesicles using short distance iMQCs." Journal of Magnetic Resonance 223 31-40 (2012).
  15. Robles, F.E., Wilson, J.W., Warren, W.S., and Fischer, M.C. "Phasor analysis for nonlinear pump-probe microscopy." Optics Express 20 17082-17092 (2012).
  16. Wilson, J.W. and Bartels, R.A. "Coherence-modulated third harmonic generation for vibrational spec-troscopy: a theoretical treatment." Journal of the Optical Society of Amercia B 29 1875-1883 (2012).
  17. Wilson, J.W., Samineni, P., Warren, W.S., and Fischer, M.C. "Cross-phase modulation spectral shifting: Nonlinear phase contrast in a pump-probe microscope." Biomedical Optics Express 3 854-862 (2012).
  18. Samineni, P., Li, B. Wilson, J.W., Warren, W.S., and Fischer, M.C. "Cross-phase modulation imaging." Optics Letters 37, 800-802 (2012). (*Reported in The Optical Society of America's Spotlight on Optics, April 2012.)
  19. Matthews, T.E., Wilson, J.W., Degan, S., Simpson, M.J., Jin, J.Y., Zhang, J.Y., and Warren, W.S. "In vivo and ex vivo epi-mode pump-probe imaging of melanin and microvasculature." Biomedical Optics Express 2, 1576-1583 (2011). (*Reported in Physics Today, July 2011.)
  20. Wilson, J.W. and Bartels, R.A. "Rapid birefringent delay scanning for coherent multiphoton impulsive Raman pump-probe spectroscopy." IEEE Journal of Selected Topics in Quantum Electronics 18, 130-139 (2012).
  21. Kupka, D., Wilson, J.W., Masihzadeh, O., and Bartels, R.A. "Distinguishing bulk and interface modulation of optical third harmonic generation due to coherent optical phonon excitation." Chemical Physics Letters 490, 97-101 (2010).
  22. Schlup, P., Wilson, J.W., and Bartels, R.A. "Sensitive and Selective Detection of Low-Frequency Vibrational Modes Through a Phase-Shifting Fourier Transform Spectroscopy." IEEE Journal of Quantum Electronics 45, 777-782 (2009).
  23. Wilson, J.W., Schlup, P., and Bartels, R.A. "Synthetic temporal aperture coherent molecular phase spec- troscopy." Chemical Physics Letters 463, 300-304 (2008). (*Editor's choice.)
  24. Wilson, J.W., Schlup, P., Lunacek, M., Whitley, D. and Bartels, R.A. "Calibration of liquid crystal ultrafast pulse shaper with inline spectral interferometry and application to coherent control with a CMA evolutionary strategy." Review of Scientific Instruments 79, 033103-033103-5 (2008).
  25. Wilson, J.W., Schlup, P., and Bartels, R.A. "Phase measurement of coherent Raman vibrational spectroscopy with chirped spectral holography." Optics Letters 33, 2116-2118 (2008).
  26. Wilson, J.W., Schlup, P., and Bartels, R.A. "Ultrafast phase and amplitude pulse shaping with a single, one-dimensional, high-resolution phase mask," Optics Express 15, 8979-8987 (2007).
  27. Schlup, P., Wilson, J.W., Hartinger, K., and Bartels, R.A. "Dispersion balancing of variable-delay monolithic pulse splitters," Applied Optics 46, 5967-5973 (2007).
  28. Hartinger K., Nirmalgandhi S., Wilson J., and Bartels R.A. "Efficient nonlinear frequency conversion with a dynamically structured nonlinearity." Optics Express 13, 6919-6930 (2005).

Invited Talks:


  • J. W. Wilson, W. S. Warren, and M. C. Fischer, "Real-time digital signal processing in multiphoton and time-resolved microscopy," in Optical Biopsy XIV: Toward Real-Time Spectroscopic Imaging and Diagnosis, San Francisco, CA, 2016, vol. 9703, p. 97030O–97030O–6.
  • 2015 "In vivo virtual biopsy of melanoma and pigmented lesions using optical nonlinearities." Colorado State University, School of Biomedical Engineering Seminar.
  • 2015 "In vivo virtual biopsy of melanoma and pigmented lesions using optical nonlinearities." University of Nebraska-Lincoln, Electrical and Computer Engineering Department Seminar.
  • 2014 "Advances in laser microscopy for pigmented lesions and melanoma." Joint presentation with F.E. Robles. Duke University, Skin Disease Research Center Monthly Meeting.
  • 2013 "Nonlinear optical spectroscopy inside living cells: leveraging excited state photodynamics for non-invasive virtual biopsy of melanoma" Colorado School of Mines, Physics Department Seminar.
  • 2013 "Nonlinear optical spectroscopy inside living cells: leveraging excited state photodynamics for non-invasive virtual biopsy of melanoma" Colorado State University, Biomedical Engineering Seminar.
  • 2012 "In vivo pump-probe microscopy of melanoma and pigmented lesions." 7th Workshop on Advanced Multiphoton and Fluorescence Lifetime Imaging Techniques, Saarland University, Saarbrucken, Germany.
  • 2012 "Pump-probe Microscopy: Using Information on Pigment Photodynamics to Detect Melanoma." Frontiers in Optical Imaging: Data Collection and Data Mining, from the Clinic to the Art Gallery, Duke University.
  • 2011 "Noninvasive optical biopsy: Applying time-resolved spectroscopy in a microscope to study and diagnose melanoma." DePauw University Chemistry Department Seminar.

Conference Posters and Talks:


  1. Wilson, J.W., Gainey, C.G., Degan, S., Zhang, J.Y., and Warren, W.S. "In vivo pump-probe microscopy reveals changes in pigment composition associated with melanoma." World Molecular Imaging Congress, Seoul, South Korea (2014).
  2. Wilson, J.W., Fischer, M.C., and Warren, W.S. "Flexible digital signal processign architecture for multiphoton microscopy." World Molecular Imaging Congress, Seoul, South Korea (2014).
  3. Wilson, J.W., Fischer, M.C., and Warren, W.S. "Digital signal processing for nonlinear optical microscopy." Gordon Conference on Lasers in Medicine and Biology, Holderness, NH (2014).
  4. Vajzovic, L., Vora, G.K., Deb, S., Wilson, J.W., Robles, F.E., Cummings, T.J., Mruthyunjaya, P., and Warren, W.S. "Optimizing Laser Parameters for Pump-Probe Microscopy of Conjunctival Melanocytic Lesions." Association for Research in Vision and Ophthalmology, Orlando, FL (2014).
  5. Wilson, J.W., Simpson, M.J., Degan, S., Gainey, C.S., Mitropoulos, T., Zhang, J.Y., and Warren, W.S. "Mapping pigment chemistry of melanoma in vivo with femtosecond pump-probe microscopy." World Molecular Imaging Congress, Savannah, GA (2013). (*Featured in the Closing Ceremony Highlight Lecture as a top abstract.)
  6. Wilson, J.W., Degan, S., Fischer, M.C., Warren, W.S. "Optical clearing and multiphoton imaging of paraffin-embedded specimens." Paper 858813. Multiphoton Microscopy in the Biomedical Sciences XIII at SPIE Photonics West, San Francisco, CA (2013).
  7. Wilson, J.W., Vazjovic, L., Robles, F.E., Cummings, T.J., Mruthyunjaya, P., and Warren, W.S. "Imaging pigment chemistry in melanocytic conjunctival lesions with pump-probe microscopy." Paper 8567-43. Ophthalmic Technologies XXIII at SPIE Photonics West, San Francisco, CA (2013).
  8. Robles, F.E., Wilson, J.W., Fischer, M.C., Warren, W.S. "Adapting phasor analysis for nonlinear pump-probe microscopy." Paper 858908. Three-Dimensional Microscopy: Image Acquisition and Processing XX at SPIE Photonics West, San Francisco, CA (2013).
  9. Wilson, J.W., Samineni, P., Fischer, M.C., Warren, W.S. "Nonlinear cross-phase modulation microscopy using spectral shifting." Conference on Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference and Photonic Applications Systems Technologies, San Jose, CA (2012) Paper JW3G.2.
  10. Wilson, J.W., Degan, S., Selim, M.A., Zhang, J.Y., and Warren, W.S. "In-vivo pump-probe microscopy of melanoma and pigmented lesions." Paper 822620. Multiphoton Microscopy in the Biomedical Sciences XII at SPIE Photonics West, San Francisco, CA (2012). (*Selected for JenLab Young Investigator Award.)
  11. Wilson, J.W., Matthews, T.E., Degan, S., Zhang, J.Y., Simpson, M.J., Warren, W.S. "Pump-probe Microscopy Captures Cellular Detail of Melanoma In-vivo." Frontiers in Optics 2011/Laser Science XXVII, San Jose, CA (2011).
  12. Wilson, J.W. and Warren, W.S. "Spectral Shifting Measurement of Cross Phase Modulation With a Balanced Photodiode." Frontiers in Optics 2011/Laser Science XXVII, San Jose, CA (2011).
  13. Simpson, M.J., Wilson, J.W., Matthews, T.E., Duarte, M., Calderbank, R., Warren, W.S. "Imaging the Distributino of Melanin in Human Skin Lesions with Pump-Probe Microscopy." Frontiers in Optics 2011/Laser Science XXVII, San Jose, CA (2011).
  14. Simpson, M.J., Matthews, T.E., Wilson, J.W., Degan, S., Selim, M.A., Warren, W.S. "Imaging the Distributions of Eumelanin and Pheomelanin in Human Tissue." World Molecular Imaging Congress, San Diego, CA (2011).
  15. Wilson, J.W., Matthews, T.E., Degan, S., Zhang, J.Y., Simpson, M.J.,Warren, W.S. "Pump-Probe Melanoma Imaging: Appications to High-Resolution and In-Vivo Microscopy." in Conference on Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference and Photonic Applications Systems Technologies, OSA Technical Digest Series (CD) (Optical Society of America, 2011), post-deadline paper PDPB5. (*Reported in Optics and Photonics News Online, May 2011.)
  16. Wilson, J.W., Bartels, R.A. "Lighthouse Ultrafast Spectroscopy: High-Speed Scanning with a Spinning Bire-fringent Delay Crystal." in Conference on Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference and Photonic Applications Systems Technologies, OSA Technical Digest Series (CD) (Optical Society of America, 2011), paper CF07.
  17. Wilson, J.W., Kupka, D., Bartels, R.A. "Coherence modulated third harmonic generation for interface vibrational spectroscopy." 23rd Annual Meeting of the IEEE Photonics Society, Denver, CO (2010).
  18. Wilson, J.W., Kupka, D., Masihzadeh, O., and Bartels, R.A. "Coherence modulated third harmonic generation for interface vibrational spectroscopy." Four Corners Section of the APS: Annual Meeting, Golden, CO (2009).
  19. Wilson, J.W., Schlup, P., and Bartels, R.A. "Direct phase-sensitive impulsive vibrational spectroscopy with spectral interferometry." 2009 International Quantum Electronics Conference, Baltimore, Maryland (2009).
  20. Kupka, D.B., Wilson, J., Schlup, P., Bartel, R. "Vibrational Coherence Modulated Interfacial Third Harmonic Generation Spectroscopy ." Conference on Lasers and Electro-Optics/International Quantum Electronics Conference, Baltimore, MD (2009).
  21. Wilson, J.W. Schlup, P., and Bartels, R.A. "Single-Shot Time Domain Measurement of Phase Response of Ultrafast Vibrational Quantum Beating." in 16th International Ultrafast Phenomena Conference, Stresa, Italy (2008).
  22. Wilson, J.W., Schlup, P., and Bartels, R.A. "Ultrafast amplitude and phase shaping with a single one-dimensional liquid crystal array," in 2007 Joint Conference on Ultrafast Optics and High Field Short Wavelength Sources, Santa Fe, NM (2007).
  23. Schlup, P., Wilson, J., and Bartels, R.A. "Amplitude and Phase Shaping of Ultrafast Laser Pulses with a Single High-Resolution Linear Liquid Crystal Array," in Conference on Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference and Photonic Applications Systems Technologies, OSA Technical Digest Series (CD) (Optical Society of America, 2007), paper CPDB9.

Patents:


  1. Bartels, R., Wilson, J., and Schlup, P. "Phase and Amplitude Light Pulse Shaping Using a One-Dimensional Phase Mask." Patent No. US 7,576,907 B1 (2009).